Cluster: Rep_2383_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_5 | Rep_2383_c_5_72 | 88611 | 89258 | + | 9.B.104.1.3 |
| pfam | Rep_2383_c_5 | Rep_2383_c_5_73 | 89287 | 89706 | + | HIT | DcpS_C |
| CAZyme | Rep_2383_c_5 | Rep_2383_c_5_74 | 89721 | 90791 | + | GT28 |
Gene ID: Rep_2383_c_5_72
Type: TC
Location: 88611 - 89258 (+)
Type: TC
Location: 88611 - 89258 (+)
Gene ID: Rep_2383_c_5_73
Type: pfam
Location: 89287 - 89706 (+)
Type: pfam
Location: 89287 - 89706 (+)
Gene ID: Rep_2383_c_5_74
Type: CAZyme
Location: 89721 - 90791 (+)
Type: CAZyme
Location: 89721 - 90791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.