Cluster: Rep_2383_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_06247
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_3 | Rep_2383_c_3_6 | 9182 | 9880 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | Rep_2383_c_3 | Rep_2383_c_3_7 | 9874 | 10686 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2383_c_3 | Rep_2383_c_3_8 | 10887 | 11759 | - | 8.A.5.1.4 |
| CAZyme | Rep_2383_c_3 | Rep_2383_c_3_9 | 11831 | 15304 | - | GH95 |
Gene ID: Rep_2383_c_3_6
Type: TC
Location: 9182 - 9880 (+)
Type: TC
Location: 9182 - 9880 (+)
Gene ID: Rep_2383_c_3_7
Type:
Location: 9874 - 10686 (+)
Type:
Location: 9874 - 10686 (+)
Gene ID: Rep_2383_c_3_8
Type: TC
Location: 10887 - 11759 (-)
Type: TC
Location: 10887 - 11759 (-)
Gene ID: Rep_2383_c_3_9
Type: CAZyme
Location: 11831 - 15304 (-)
Type: CAZyme
Location: 11831 - 15304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.