Cluster: Rep_2383_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_2 | Rep_2383_c_2_253 | 279298 | 280170 | - | 3.A.1.1.39 |
| TC | Rep_2383_c_2 | Rep_2383_c_2_254 | 280185 | 281123 | - | 3.A.1.1.11 |
| STP | Rep_2383_c_2 | Rep_2383_c_2_255 | 281164 | 284142 | - | SBP_bac_1 |
| CAZyme | Rep_2383_c_2 | Rep_2383_c_2_256 | 284474 | 286051 | + | CBM91 | GH43_12 |
Gene ID: Rep_2383_c_2_253
Type: TC
Location: 279298 - 280170 (-)
Type: TC
Location: 279298 - 280170 (-)
Gene ID: Rep_2383_c_2_254
Type: TC
Location: 280185 - 281123 (-)
Type: TC
Location: 280185 - 281123 (-)
Gene ID: Rep_2383_c_2_255
Type: STP
Location: 281164 - 284142 (-)
Type: STP
Location: 281164 - 284142 (-)
Gene ID: Rep_2383_c_2_256
Type: CAZyme
Location: 284474 - 286051 (+)
Type: CAZyme
Location: 284474 - 286051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.