Cluster: Rep_2383_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_2 | Rep_2383_c_2_220 | 238612 | 240345 | - | 9.B.74.1.4 |
| STP | Rep_2383_c_2 | Rep_2383_c_2_221 | 240444 | 241019 | - | TetR_N |
| TC | Rep_2383_c_2 | Rep_2383_c_2_222 | 241019 | 242605 | - | 2.A.21.2.5 |
| TC | Rep_2383_c_2 | Rep_2383_c_2_223 | 242638 | 243981 | - | 2.A.40.7.6 |
| CAZyme | Rep_2383_c_2 | Rep_2383_c_2_224 | 244062 | 245327 | - | GH27 |
Gene ID: Rep_2383_c_2_220
Type: TC
Location: 238612 - 240345 (-)
Type: TC
Location: 238612 - 240345 (-)
Gene ID: Rep_2383_c_2_221
Type: STP
Location: 240444 - 241019 (-)
Type: STP
Location: 240444 - 241019 (-)
Gene ID: Rep_2383_c_2_222
Type: TC
Location: 241019 - 242605 (-)
Type: TC
Location: 241019 - 242605 (-)
Gene ID: Rep_2383_c_2_223
Type: TC
Location: 242638 - 243981 (-)
Type: TC
Location: 242638 - 243981 (-)
Gene ID: Rep_2383_c_2_224
Type: CAZyme
Location: 244062 - 245327 (-)
Type: CAZyme
Location: 244062 - 245327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.