Cluster: Rep_2383_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_2 | Rep_2383_c_2_156 | 161686 | 165615 | - | 2.A.6.3.6 |
| TC | Rep_2383_c_2 | Rep_2383_c_2_157 | 165634 | 167487 | - | 3.A.1.135.5 |
| TC | Rep_2383_c_2 | Rep_2383_c_2_158 | 167484 | 169238 | - | 3.A.1.135.5 |
| pfam | Rep_2383_c_2 | Rep_2383_c_2_159 | 169295 | 170527 | - | PG_binding_1 |
| CAZyme | Rep_2383_c_2 | Rep_2383_c_2_160 | 170597 | 171319 | - | CE4 |
Gene ID: Rep_2383_c_2_156
Type: TC
Location: 161686 - 165615 (-)
Type: TC
Location: 161686 - 165615 (-)
Gene ID: Rep_2383_c_2_157
Type: TC
Location: 165634 - 167487 (-)
Type: TC
Location: 165634 - 167487 (-)
Gene ID: Rep_2383_c_2_158
Type: TC
Location: 167484 - 169238 (-)
Type: TC
Location: 167484 - 169238 (-)
Gene ID: Rep_2383_c_2_159
Type: pfam
Location: 169295 - 170527 (-)
Type: pfam
Location: 169295 - 170527 (-)
Gene ID: Rep_2383_c_2_160
Type: CAZyme
Location: 170597 - 171319 (-)
Type: CAZyme
Location: 170597 - 171319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.