Cluster: Rep_2383_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_01043
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_1 | Rep_2383_c_1_292 | 319779 | 321914 | + | 3.A.11.1.1 |
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_293 | 321976 | 323895 | + | GH182 |
| pfam | Rep_2383_c_1 | Rep_2383_c_1_294 | 324051 | 325031 | - | DNA_pol3_delta | DNA_pol3_delta_C |
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_295 | 325159 | 326316 | + | GT4 |
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_296 | 326309 | 327217 | + | GT2 |
Gene ID: Rep_2383_c_1_292
Type: TC
Location: 319779 - 321914 (+)
Type: TC
Location: 319779 - 321914 (+)
Gene ID: Rep_2383_c_1_293
Type: CAZyme
Location: 321976 - 323895 (+)
Type: CAZyme
Location: 321976 - 323895 (+)
Gene ID: Rep_2383_c_1_294
Type: pfam
Location: 324051 - 325031 (-)
Type: pfam
Location: 324051 - 325031 (-)
Gene ID: Rep_2383_c_1_295
Type: CAZyme
Location: 325159 - 326316 (+)
Type: CAZyme
Location: 325159 - 326316 (+)
Gene ID: Rep_2383_c_1_296
Type: CAZyme
Location: 326309 - 327217 (+)
Type: CAZyme
Location: 326309 - 327217 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.