Cluster: Rep_2383_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_10998
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_1 | Rep_2383_c_1_240 | 267133 | 268953 | + | 3.A.1.106.14 |
| TC | Rep_2383_c_1 | Rep_2383_c_1_241 | 268953 | 270716 | + | 3.A.1.106.3 |
| TF | Rep_2383_c_1 | Rep_2383_c_1_242 | 270761 | 271747 | + | LacI |
| pfam | Rep_2383_c_1 | Rep_2383_c_1_243 | 271769 | 273088 | + | Big_2 |
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_244 | 273171 | 274445 | - | CE1 |
Gene ID: Rep_2383_c_1_240
Type: TC
Location: 267133 - 268953 (+)
Type: TC
Location: 267133 - 268953 (+)
Gene ID: Rep_2383_c_1_241
Type: TC
Location: 268953 - 270716 (+)
Type: TC
Location: 268953 - 270716 (+)
Gene ID: Rep_2383_c_1_242
Type: TF
Location: 270761 - 271747 (+)
Type: TF
Location: 270761 - 271747 (+)
Gene ID: Rep_2383_c_1_243
Type: pfam
Location: 271769 - 273088 (+)
Type: pfam
Location: 271769 - 273088 (+)
Gene ID: Rep_2383_c_1_244
Type: CAZyme
Location: 273171 - 274445 (-)
Type: CAZyme
Location: 273171 - 274445 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.