Cluster: Rep_2383_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_00008
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_6 | 7803 | 10058 | + | GT2 |
| TC | Rep_2383_c_1 | Rep_2383_c_1_7 | 10077 | 10868 | + | 3.A.1.103.1 |
| TC | Rep_2383_c_1 | Rep_2383_c_1_8 | 10920 | 11693 | + | 3.A.1.103.1 |
| pfam | Rep_2383_c_1 | Rep_2383_c_1_9 | 11641 | 12096 | + | CTP_transf_like |
| CAZyme | Rep_2383_c_1 | Rep_2383_c_1_10 | 12074 | 14272 | + | GT2 |
Gene ID: Rep_2383_c_1_6
Type: CAZyme
Location: 7803 - 10058 (+)
Type: CAZyme
Location: 7803 - 10058 (+)
Gene ID: Rep_2383_c_1_7
Type: TC
Location: 10077 - 10868 (+)
Type: TC
Location: 10077 - 10868 (+)
Gene ID: Rep_2383_c_1_8
Type: TC
Location: 10920 - 11693 (+)
Type: TC
Location: 10920 - 11693 (+)
Gene ID: Rep_2383_c_1_9
Type: pfam
Location: 11641 - 12096 (+)
Type: pfam
Location: 11641 - 12096 (+)
Gene ID: Rep_2383_c_1_10
Type: CAZyme
Location: 12074 - 14272 (+)
Type: CAZyme
Location: 12074 - 14272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.