Cluster: Rep_2383_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_0 | Rep_2383_c_0_409 | 438003 | 439634 | - | 8.A.7.1.1 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_410 | 439776 | 440846 | + | 9.B.10.1.1 |
| pfam | Rep_2383_c_0 | Rep_2383_c_0_411 | 440858 | 441805 | + | cobW | DUF1980_C |
| NULL(UNKNOWN) | Rep_2383_c_0 | Rep_2383_c_0_412 | 441915 | 443639 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_413 | 443975 | 446032 | - | GH13_39 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_414 | 446316 | 448175 | - | 3.A.16.1.1 |
Gene ID: Rep_2383_c_0_409
Type: TC
Location: 438003 - 439634 (-)
Type: TC
Location: 438003 - 439634 (-)
Gene ID: Rep_2383_c_0_410
Type: TC
Location: 439776 - 440846 (+)
Type: TC
Location: 439776 - 440846 (+)
Gene ID: Rep_2383_c_0_411
Type: pfam
Location: 440858 - 441805 (+)
Type: pfam
Location: 440858 - 441805 (+)
Gene ID: Rep_2383_c_0_412
Type:
Location: 441915 - 443639 (-)
Type:
Location: 441915 - 443639 (-)
Gene ID: Rep_2383_c_0_413
Type: CAZyme
Location: 443975 - 446032 (-)
Type: CAZyme
Location: 443975 - 446032 (-)
Gene ID: Rep_2383_c_0_414
Type: TC
Location: 446316 - 448175 (-)
Type: TC
Location: 446316 - 448175 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.