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Cluster: Rep_2383_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2383_c_0 Rep_2383_c_0_343 363899 365668 - 3.A.1.135.5
TC Rep_2383_c_0 Rep_2383_c_0_344 365686 367401 - 3.A.1.135.7
TC Rep_2383_c_0 Rep_2383_c_0_345 367398 369089 - 2.A.25.1.3
TC Rep_2383_c_0 Rep_2383_c_0_346 369356 371119 + 2.A.58.2.2
CAZyme Rep_2383_c_0 Rep_2383_c_0_347 371221 373389 - GH36
pfam Rep_2383_c_0 Rep_2383_c_0_348 373467 374141 - ACPS
pfam Rep_2383_c_0 Rep_2383_c_0_349 374156 375136 - PTA_PTB
TC Rep_2383_c_0 Rep_2383_c_0_350 375309 375860 + 3.A.1.25.5
Gene ID: Rep_2383_c_0_343
Type: TC
Location: 363899 - 365668 (-)
Gene ID: Rep_2383_c_0_344
Type: TC
Location: 365686 - 367401 (-)
Gene ID: Rep_2383_c_0_345
Type: TC
Location: 367398 - 369089 (-)
Gene ID: Rep_2383_c_0_346
Type: TC
Location: 369356 - 371119 (+)
Gene ID: Rep_2383_c_0_347
Type: CAZyme
Location: 371221 - 373389 (-)
Gene ID: Rep_2383_c_0_348
Type: pfam
Location: 373467 - 374141 (-)
Gene ID: Rep_2383_c_0_349
Type: pfam
Location: 374156 - 375136 (-)
Gene ID: Rep_2383_c_0_350
Type: TC
Location: 375309 - 375860 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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