Cluster: Rep_2383_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_09793
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2383_c_0 | Rep_2383_c_0_328 | 342346 | 343260 | - | 3.A.1.1.20 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_329 | 343261 | 344124 | - | 3.A.1.1.31 |
| NULL(UNKNOWN) | Rep_2383_c_0 | Rep_2383_c_0_330 | 344141 | 346507 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2383_c_0 | Rep_2383_c_0_331 | 346689 | 347519 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_332 | 347516 | 349948 | - | GH97 |
Gene ID: Rep_2383_c_0_328
Type: TC
Location: 342346 - 343260 (-)
Type: TC
Location: 342346 - 343260 (-)
Gene ID: Rep_2383_c_0_329
Type: TC
Location: 343261 - 344124 (-)
Type: TC
Location: 343261 - 344124 (-)
Gene ID: Rep_2383_c_0_330
Type:
Location: 344141 - 346507 (-)
Type:
Location: 344141 - 346507 (-)
Gene ID: Rep_2383_c_0_331
Type: TF
Location: 346689 - 347519 (+)
Type: TF
Location: 346689 - 347519 (+)
Gene ID: Rep_2383_c_0_332
Type: CAZyme
Location: 347516 - 349948 (-)
Type: CAZyme
Location: 347516 - 349948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.