Cluster: Rep_2383_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_00387
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_246 | 249904 | 251196 | + | CE1 |
| STP | Rep_2383_c_0 | Rep_2383_c_0_247 | 251323 | 251943 | + | TetR_N |
| TC | Rep_2383_c_0 | Rep_2383_c_0_248 | 252056 | 253831 | + | 3.A.1.21.1 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_249 | 253828 | 255561 | + | 3.A.1.21.1 |
Gene ID: Rep_2383_c_0_246
Type: CAZyme
Location: 249904 - 251196 (+)
Type: CAZyme
Location: 249904 - 251196 (+)
Gene ID: Rep_2383_c_0_247
Type: STP
Location: 251323 - 251943 (+)
Type: STP
Location: 251323 - 251943 (+)
Gene ID: Rep_2383_c_0_248
Type: TC
Location: 252056 - 253831 (+)
Type: TC
Location: 252056 - 253831 (+)
Gene ID: Rep_2383_c_0_249
Type: TC
Location: 253828 - 255561 (+)
Type: TC
Location: 253828 - 255561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.