Cluster: Rep_2383_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2383
- CGC Family ID: CGCFAM_10995
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2383_c_0 | Rep_2383_c_0_21 | 17190 | 18725 | - | GH39 |
| TF | Rep_2383_c_0 | Rep_2383_c_0_22 | 18794 | 19807 | - | HTH_3 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_23 | 19929 | 21974 | - | 3.A.1.134.9 |
| TC | Rep_2383_c_0 | Rep_2383_c_0_24 | 21971 | 22738 | - | 3.A.1.134.4 |
Gene ID: Rep_2383_c_0_21
Type: CAZyme
Location: 17190 - 18725 (-)
Type: CAZyme
Location: 17190 - 18725 (-)
Gene ID: Rep_2383_c_0_22
Type: TF
Location: 18794 - 19807 (-)
Type: TF
Location: 18794 - 19807 (-)
Gene ID: Rep_2383_c_0_23
Type: TC
Location: 19929 - 21974 (-)
Type: TC
Location: 19929 - 21974 (-)
Gene ID: Rep_2383_c_0_24
Type: TC
Location: 21971 - 22738 (-)
Type: TC
Location: 21971 - 22738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
V9D3004
Species
V9D3004 sp902493385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.