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Cluster: Rep_2378_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2378_c_0 Rep_2378_c_0_960 971964 972749 + GT111
NULL(UNKNOWN) Rep_2378_c_0 Rep_2378_c_0_961 972753 973910 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2378_c_0 Rep_2378_c_0_962 973903 975021 + GT4
pfam Rep_2378_c_0 Rep_2378_c_0_963 975044 976060 + Stealth_CR2 | Stealth_CR1
CAZyme Rep_2378_c_0 Rep_2378_c_0_964 976066 977160 + GT4
CAZyme Rep_2378_c_0 Rep_2378_c_0_965 977190 978107 + GT2
TC Rep_2378_c_0 Rep_2378_c_0_966 978097 979563 + 2.A.66.2.16
pfam Rep_2378_c_0 Rep_2378_c_0_967 979560 980660 + GLF | NAD_binding_8
CAZyme Rep_2378_c_0 Rep_2378_c_0_968 980650 981672 + GT2
Gene ID: Rep_2378_c_0_960
Type: CAZyme
Location: 971964 - 972749 (+)
Gene ID: Rep_2378_c_0_961
Type:
Location: 972753 - 973910 (+)
Gene ID: Rep_2378_c_0_962
Type: CAZyme
Location: 973903 - 975021 (+)
Gene ID: Rep_2378_c_0_963
Type: pfam
Location: 975044 - 976060 (+)
Gene ID: Rep_2378_c_0_964
Type: CAZyme
Location: 976066 - 977160 (+)
Gene ID: Rep_2378_c_0_965
Type: CAZyme
Location: 977190 - 978107 (+)
Gene ID: Rep_2378_c_0_966
Type: TC
Location: 978097 - 979563 (+)
Gene ID: Rep_2378_c_0_967
Type: pfam
Location: 979560 - 980660 (+)
Gene ID: Rep_2378_c_0_968
Type: CAZyme
Location: 980650 - 981672 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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