dbCAN Logo

Cluster: Rep_2378_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2378_c_0 Rep_2378_c_0_706 710288 711589 + GH13
NULL(UNKNOWN) Rep_2378_c_0 Rep_2378_c_0_707 711586 712122 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_2378_c_0 Rep_2378_c_0_708 712162 713613 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2378_c_0 Rep_2378_c_0_709 713627 715666 - GH133
TC Rep_2378_c_0 Rep_2378_c_0_710 715764 716594 - 3.A.1.3.25
TC Rep_2378_c_0 Rep_2378_c_0_711 716578 717288 - 3.A.1.3.15
TC Rep_2378_c_0 Rep_2378_c_0_712 717315 718178 - 3.A.1.3.2
pfam Rep_2378_c_0 Rep_2378_c_0_713 718347 719447 + Metallophos | Metallophos_2
TC Rep_2378_c_0 Rep_2378_c_0_714 719452 722097 + 1.C.105.2.8
Gene ID: Rep_2378_c_0_706
Type: CAZyme
Location: 710288 - 711589 (+)
Gene ID: Rep_2378_c_0_707
Type:
Location: 711586 - 712122 (+)
Gene ID: Rep_2378_c_0_708
Type:
Location: 712162 - 713613 (-)
Gene ID: Rep_2378_c_0_709
Type: CAZyme
Location: 713627 - 715666 (-)
Gene ID: Rep_2378_c_0_710
Type: TC
Location: 715764 - 716594 (-)
Gene ID: Rep_2378_c_0_711
Type: TC
Location: 716578 - 717288 (-)
Gene ID: Rep_2378_c_0_712
Type: TC
Location: 717315 - 718178 (-)
Gene ID: Rep_2378_c_0_713
Type: pfam
Location: 718347 - 719447 (+)
Gene ID: Rep_2378_c_0_714
Type: TC
Location: 719452 - 722097 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List