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Cluster: Rep_2378_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2378_c_0 Rep_2378_c_0_161 155348 156337 - 2.A.36.2.1
NULL(UNKNOWN) Rep_2378_c_0 Rep_2378_c_0_162 156420 157208 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_2378_c_0 Rep_2378_c_0_163 157261 158850 - SBP_bac_1
TC Rep_2378_c_0 Rep_2378_c_0_164 158847 159722 - 3.A.1.1.25
TC Rep_2378_c_0 Rep_2378_c_0_165 159726 160622 - 3.A.1.1.17
TC Rep_2378_c_0 Rep_2378_c_0_166 160609 161712 - 3.A.1.1.38
pfam Rep_2378_c_0 Rep_2378_c_0_167 161724 162563 - DUF2971
CAZyme Rep_2378_c_0 Rep_2378_c_0_168 162704 164185 - GH77
TF Rep_2378_c_0 Rep_2378_c_0_169 164204 165211 - LacI
TC Rep_2378_c_0 Rep_2378_c_0_170 165241 166107 - 3.A.1.1.45
TC Rep_2378_c_0 Rep_2378_c_0_171 166107 166991 - 3.A.1.1.45
TC Rep_2378_c_0 Rep_2378_c_0_172 167144 168475 - 3.A.1.1.45
Gene ID: Rep_2378_c_0_161
Type: TC
Location: 155348 - 156337 (-)
Gene ID: Rep_2378_c_0_162
Type:
Location: 156420 - 157208 (-)
Gene ID: Rep_2378_c_0_163
Type: STP
Location: 157261 - 158850 (-)
Gene ID: Rep_2378_c_0_164
Type: TC
Location: 158847 - 159722 (-)
Gene ID: Rep_2378_c_0_165
Type: TC
Location: 159726 - 160622 (-)
Gene ID: Rep_2378_c_0_166
Type: TC
Location: 160609 - 161712 (-)
Gene ID: Rep_2378_c_0_167
Type: pfam
Location: 161724 - 162563 (-)
Gene ID: Rep_2378_c_0_168
Type: CAZyme
Location: 162704 - 164185 (-)
Gene ID: Rep_2378_c_0_169
Type: TF
Location: 164204 - 165211 (-)
Gene ID: Rep_2378_c_0_170
Type: TC
Location: 165241 - 166107 (-)
Gene ID: Rep_2378_c_0_171
Type: TC
Location: 166107 - 166991 (-)
Gene ID: Rep_2378_c_0_172
Type: TC
Location: 167144 - 168475 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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