Cluster: Rep_2378_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2378
- CGC Family ID: CGCFAM_01043
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2378_c_0 | Rep_2378_c_0_1333 | 1381860 | 1383968 | + | 3.A.11.1.1 |
| pfam | Rep_2378_c_0 | Rep_2378_c_0_1334 | 1384052 | 1385032 | + | DNA_pol3_delta | DNA_pol3_delta_C |
| CAZyme | Rep_2378_c_0 | Rep_2378_c_0_1335 | 1385029 | 1386555 | + | GH5_2 |
Gene ID: Rep_2378_c_0_1333
Type: TC
Location: 1381860 - 1383968 (+)
Type: TC
Location: 1381860 - 1383968 (+)
Gene ID: Rep_2378_c_0_1334
Type: pfam
Location: 1384052 - 1385032 (+)
Type: pfam
Location: 1384052 - 1385032 (+)
Gene ID: Rep_2378_c_0_1335
Type: CAZyme
Location: 1385029 - 1386555 (+)
Type: CAZyme
Location: 1385029 - 1386555 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyrivibrio_A
Species
Butyrivibrio_A crossotus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.