Cluster: Rep_2378_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2378
- CGC Family ID: CGCFAM_00169
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2378_c_0 | Rep_2378_c_0_1315 | 1360766 | 1362784 | + | GH13_9 |
| TC | Rep_2378_c_0 | Rep_2378_c_0_1316 | 1362784 | 1363653 | + | 1.A.23.2.1 |
| peptidase | Rep_2378_c_0 | Rep_2378_c_0_1317 | 1363656 | 1364417 | + | M15.021 |
| pfam | Rep_2378_c_0 | Rep_2378_c_0_1318 | 1364469 | 1365845 | - | Lyase_1 | ASL_C2 |
| TC | Rep_2378_c_0 | Rep_2378_c_0_1319 | 1365842 | 1368463 | - | 9.B.144.1.5 |
| pfam | Rep_2378_c_0 | Rep_2378_c_0_1320 | 1368456 | 1368893 | - | GtrA_DPMS_TM |
| CAZyme | Rep_2378_c_0 | Rep_2378_c_0_1321 | 1368877 | 1369839 | - | GT2 |
Gene ID: Rep_2378_c_0_1315
Type: CAZyme
Location: 1360766 - 1362784 (+)
Type: CAZyme
Location: 1360766 - 1362784 (+)
Gene ID: Rep_2378_c_0_1316
Type: TC
Location: 1362784 - 1363653 (+)
Type: TC
Location: 1362784 - 1363653 (+)
Gene ID: Rep_2378_c_0_1317
Type: peptidase
Location: 1363656 - 1364417 (+)
Type: peptidase
Location: 1363656 - 1364417 (+)
Gene ID: Rep_2378_c_0_1318
Type: pfam
Location: 1364469 - 1365845 (-)
Type: pfam
Location: 1364469 - 1365845 (-)
Gene ID: Rep_2378_c_0_1319
Type: TC
Location: 1365842 - 1368463 (-)
Type: TC
Location: 1365842 - 1368463 (-)
Gene ID: Rep_2378_c_0_1320
Type: pfam
Location: 1368456 - 1368893 (-)
Type: pfam
Location: 1368456 - 1368893 (-)
Gene ID: Rep_2378_c_0_1321
Type: CAZyme
Location: 1368877 - 1369839 (-)
Type: CAZyme
Location: 1368877 - 1369839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyrivibrio_A
Species
Butyrivibrio_A crossotus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.