Cluster: Rep_2378_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2378
- CGC Family ID: CGCFAM_08942
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2378_c_0 | Rep_2378_c_0_1057 | 1080018 | 1080386 | + | 1.E.14.1.1 |
| TC | Rep_2378_c_0 | Rep_2378_c_0_1058 | 1080379 | 1081071 | + | 2.A.122.1.6 |
| pfam | Rep_2378_c_0 | Rep_2378_c_0_1059 | 1081170 | 1082774 | + | PEPCK_ATP |
| CAZyme | Rep_2378_c_0 | Rep_2378_c_0_1060 | 1082857 | 1083813 | - | CE4 |
Gene ID: Rep_2378_c_0_1057
Type: TC
Location: 1080018 - 1080386 (+)
Type: TC
Location: 1080018 - 1080386 (+)
Gene ID: Rep_2378_c_0_1058
Type: TC
Location: 1080379 - 1081071 (+)
Type: TC
Location: 1080379 - 1081071 (+)
Gene ID: Rep_2378_c_0_1059
Type: pfam
Location: 1081170 - 1082774 (+)
Type: pfam
Location: 1081170 - 1082774 (+)
Gene ID: Rep_2378_c_0_1060
Type: CAZyme
Location: 1082857 - 1083813 (-)
Type: CAZyme
Location: 1082857 - 1083813 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Butyrivibrio_A
Species
Butyrivibrio_A crossotus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.