Cluster: Rep_2375_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_01216
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_80 | Rep_2375_c_80_3 | 953 | 1672 | - | GT2 |
| CAZyme | Rep_2375_c_80 | Rep_2375_c_80_4 | 1648 | 2553 | - | GT2 |
| NULL(UNKNOWN) | Rep_2375_c_80 | Rep_2375_c_80_5 | 2543 | 3778 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2375_c_80 | Rep_2375_c_80_6 | 3775 | 5217 | - | 2.A.66.2.6 |
Gene ID: Rep_2375_c_80_3
Type: CAZyme
Location: 953 - 1672 (-)
Type: CAZyme
Location: 953 - 1672 (-)
Gene ID: Rep_2375_c_80_4
Type: CAZyme
Location: 1648 - 2553 (-)
Type: CAZyme
Location: 1648 - 2553 (-)
Gene ID: Rep_2375_c_80_5
Type:
Location: 2543 - 3778 (-)
Type:
Location: 2543 - 3778 (-)
Gene ID: Rep_2375_c_80_6
Type: TC
Location: 3775 - 5217 (-)
Type: TC
Location: 3775 - 5217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.