Cluster: Rep_2375_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_78 | Rep_2375_c_78_5 | 5334 | 6023 | + | 9.B.18.1.2 |
| CAZyme | Rep_2375_c_78 | Rep_2375_c_78_6 | 6035 | 7132 | + | GT2 |
| TC | Rep_2375_c_78 | Rep_2375_c_78_7 | 7110 | 8993 | + | 9.B.18.2.1 |
| CAZyme | Rep_2375_c_78 | Rep_2375_c_78_8 | 9022 | 10152 | + | GT4 |
Gene ID: Rep_2375_c_78_5
Type: TC
Location: 5334 - 6023 (+)
Type: TC
Location: 5334 - 6023 (+)
Gene ID: Rep_2375_c_78_6
Type: CAZyme
Location: 6035 - 7132 (+)
Type: CAZyme
Location: 6035 - 7132 (+)
Gene ID: Rep_2375_c_78_7
Type: TC
Location: 7110 - 8993 (+)
Type: TC
Location: 7110 - 8993 (+)
Gene ID: Rep_2375_c_78_8
Type: CAZyme
Location: 9022 - 10152 (+)
Type: CAZyme
Location: 9022 - 10152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.