Cluster: Rep_2375_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_71 | Rep_2375_c_71_14 | 8174 | 9910 | + | 3.A.1.135.5 |
| TC | Rep_2375_c_71 | Rep_2375_c_71_15 | 9910 | 11778 | + | 3.A.1.135.5 |
| pfam | Rep_2375_c_71 | Rep_2375_c_71_16 | 11975 | 12457 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | Rep_2375_c_71 | Rep_2375_c_71_17 | 12705 | 13130 | - | Cupin_2 |
| CAZyme | Rep_2375_c_71 | Rep_2375_c_71_18 | 13224 | 14327 | - | GH105 |
Gene ID: Rep_2375_c_71_14
Type: TC
Location: 8174 - 9910 (+)
Type: TC
Location: 8174 - 9910 (+)
Gene ID: Rep_2375_c_71_15
Type: TC
Location: 9910 - 11778 (+)
Type: TC
Location: 9910 - 11778 (+)
Gene ID: Rep_2375_c_71_16
Type: pfam
Location: 11975 - 12457 (-)
Type: pfam
Location: 11975 - 12457 (-)
Gene ID: Rep_2375_c_71_17
Type: pfam
Location: 12705 - 13130 (-)
Type: pfam
Location: 12705 - 13130 (-)
Gene ID: Rep_2375_c_71_18
Type: CAZyme
Location: 13224 - 14327 (-)
Type: CAZyme
Location: 13224 - 14327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.