Cluster: Rep_2375_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_00689
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_54 | Rep_2375_c_54_5 | 3068 | 4414 | + | 2.A.66.1.28 |
| TC | Rep_2375_c_54 | Rep_2375_c_54_6 | 4500 | 5030 | + | 9.B.156.3.1 |
| CAZyme | Rep_2375_c_54 | Rep_2375_c_54_7 | 5017 | 6048 | - | GH25 |
| TC | Rep_2375_c_54 | Rep_2375_c_54_8 | 6238 | 6978 | + | 1.A.8.13.3 |
Gene ID: Rep_2375_c_54_5
Type: TC
Location: 3068 - 4414 (+)
Type: TC
Location: 3068 - 4414 (+)
Gene ID: Rep_2375_c_54_6
Type: TC
Location: 4500 - 5030 (+)
Type: TC
Location: 4500 - 5030 (+)
Gene ID: Rep_2375_c_54_7
Type: CAZyme
Location: 5017 - 6048 (-)
Type: CAZyme
Location: 5017 - 6048 (-)
Gene ID: Rep_2375_c_54_8
Type: TC
Location: 6238 - 6978 (+)
Type: TC
Location: 6238 - 6978 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.