Cluster: Rep_2375_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_03408
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_315 | Rep_2375_c_315_9 | 13340 | 14317 | + | 2.A.19.5.2 |
| TC | Rep_2375_c_315 | Rep_2375_c_315_10 | 14422 | 16062 | + | 8.A.7.1.1 |
| CAZyme | Rep_2375_c_315 | Rep_2375_c_315_11 | 16182 | 17387 | + | GT2 |
| TC | Rep_2375_c_315 | Rep_2375_c_315_12 | 17480 | 18877 | + | 2.A.40.7.6 |
| pfam | Rep_2375_c_315 | Rep_2375_c_315_13 | 18903 | 19724 | + | Acyltransferase |
| CAZyme | Rep_2375_c_315 | Rep_2375_c_315_14 | 19741 | 20565 | + | GT8 |
Gene ID: Rep_2375_c_315_9
Type: TC
Location: 13340 - 14317 (+)
Type: TC
Location: 13340 - 14317 (+)
Gene ID: Rep_2375_c_315_10
Type: TC
Location: 14422 - 16062 (+)
Type: TC
Location: 14422 - 16062 (+)
Gene ID: Rep_2375_c_315_11
Type: CAZyme
Location: 16182 - 17387 (+)
Type: CAZyme
Location: 16182 - 17387 (+)
Gene ID: Rep_2375_c_315_12
Type: TC
Location: 17480 - 18877 (+)
Type: TC
Location: 17480 - 18877 (+)
Gene ID: Rep_2375_c_315_13
Type: pfam
Location: 18903 - 19724 (+)
Type: pfam
Location: 18903 - 19724 (+)
Gene ID: Rep_2375_c_315_14
Type: CAZyme
Location: 19741 - 20565 (+)
Type: CAZyme
Location: 19741 - 20565 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.