Cluster: Rep_2375_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_298 | Rep_2375_c_298_5 | 3153 | 7775 | + | CE8 |
| TF | Rep_2375_c_298 | Rep_2375_c_298_6 | 7962 | 10151 | + | HTH_AraC |
| STP | Rep_2375_c_298 | Rep_2375_c_298_7 | 10153 | 11697 | + | SBP_bac_1 |
| TC | Rep_2375_c_298 | Rep_2375_c_298_8 | 11777 | 13024 | - | 2.A.86.1.8 |
Gene ID: Rep_2375_c_298_5
Type: CAZyme
Location: 3153 - 7775 (+)
Type: CAZyme
Location: 3153 - 7775 (+)
Gene ID: Rep_2375_c_298_6
Type: TF
Location: 7962 - 10151 (+)
Type: TF
Location: 7962 - 10151 (+)
Gene ID: Rep_2375_c_298_7
Type: STP
Location: 10153 - 11697 (+)
Type: STP
Location: 10153 - 11697 (+)
Gene ID: Rep_2375_c_298_8
Type: TC
Location: 11777 - 13024 (-)
Type: TC
Location: 11777 - 13024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.