Cluster: Rep_2375_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_292 | Rep_2375_c_292_1 | 3 | 1526 | + | GH94 |
| CAZyme | Rep_2375_c_292 | Rep_2375_c_292_2 | 1602 | 3041 | + | GH1 |
| NULL(UNKNOWN) | Rep_2375_c_292 | Rep_2375_c_292_3 | 3143 | 3829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2375_c_292 | Rep_2375_c_292_4 | 4439 | 5878 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| TC | Rep_2375_c_292 | Rep_2375_c_292_5 | 6038 | 7153 | - | 2.A.86.1.3 |
Gene ID: Rep_2375_c_292_1
Type: CAZyme
Location: 3 - 1526 (+)
Type: CAZyme
Location: 3 - 1526 (+)
Gene ID: Rep_2375_c_292_2
Type: CAZyme
Location: 1602 - 3041 (+)
Type: CAZyme
Location: 1602 - 3041 (+)
Gene ID: Rep_2375_c_292_3
Type:
Location: 3143 - 3829 (-)
Type:
Location: 3143 - 3829 (-)
Gene ID: Rep_2375_c_292_4
Type: pfam
Location: 4439 - 5878 (-)
Type: pfam
Location: 4439 - 5878 (-)
Gene ID: Rep_2375_c_292_5
Type: TC
Location: 6038 - 7153 (-)
Type: TC
Location: 6038 - 7153 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.