Cluster: Rep_2375_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_00917
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_214 | Rep_2375_c_214_2 | 902 | 5506 | - | GH28 |
| pfam | Rep_2375_c_214 | Rep_2375_c_214_3 | 5843 | 9454 | - | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| pfam | Rep_2375_c_214 | Rep_2375_c_214_4 | 9444 | 12731 | - | PDDEXK_1 | ADDB_N |
| TC | Rep_2375_c_214 | Rep_2375_c_214_5 | 12736 | 13443 | - | 8.A.59.4.1 |
Gene ID: Rep_2375_c_214_2
Type: CAZyme
Location: 902 - 5506 (-)
Type: CAZyme
Location: 902 - 5506 (-)
Gene ID: Rep_2375_c_214_3
Type: pfam
Location: 5843 - 9454 (-)
Type: pfam
Location: 5843 - 9454 (-)
Gene ID: Rep_2375_c_214_4
Type: pfam
Location: 9444 - 12731 (-)
Type: pfam
Location: 9444 - 12731 (-)
Gene ID: Rep_2375_c_214_5
Type: TC
Location: 12736 - 13443 (-)
Type: TC
Location: 12736 - 13443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.