Cluster: Rep_2375_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_209 | Rep_2375_c_209_7 | 5879 | 7789 | + | GH13_9 |
| pfam | Rep_2375_c_209 | Rep_2375_c_209_8 | 8049 | 11219 | + | DUF6240 | DUF6240 |
| pfam | Rep_2375_c_209 | Rep_2375_c_209_9 | 11366 | 12934 | + | Flagellin_N | Flagellin_C |
| TC | Rep_2375_c_209 | Rep_2375_c_209_10 | 13191 | 13739 | - | 2.A.51.1.6 |
| TC | Rep_2375_c_209 | Rep_2375_c_209_11 | 13736 | 15637 | - | 3.A.1.121.4 |
Gene ID: Rep_2375_c_209_7
Type: CAZyme
Location: 5879 - 7789 (+)
Type: CAZyme
Location: 5879 - 7789 (+)
Gene ID: Rep_2375_c_209_8
Type: pfam
Location: 8049 - 11219 (+)
Type: pfam
Location: 8049 - 11219 (+)
Gene ID: Rep_2375_c_209_9
Type: pfam
Location: 11366 - 12934 (+)
Type: pfam
Location: 11366 - 12934 (+)
Gene ID: Rep_2375_c_209_10
Type: TC
Location: 13191 - 13739 (-)
Type: TC
Location: 13191 - 13739 (-)
Gene ID: Rep_2375_c_209_11
Type: TC
Location: 13736 - 15637 (-)
Type: TC
Location: 13736 - 15637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.