Cluster: Rep_2375_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_165 | Rep_2375_c_165_8 | 9982 | 10578 | - | 4.F.1.1.7 |
| pfam | Rep_2375_c_165 | Rep_2375_c_165_9 | 10598 | 11806 | - | Iso_dh |
| peptidase | Rep_2375_c_165 | Rep_2375_c_165_10 | 11993 | 13831 | + | C44.001 |
| CAZyme | Rep_2375_c_165 | Rep_2375_c_165_11 | 13970 | 16438 | - | GT35 |
Gene ID: Rep_2375_c_165_8
Type: TC
Location: 9982 - 10578 (-)
Type: TC
Location: 9982 - 10578 (-)
Gene ID: Rep_2375_c_165_9
Type: pfam
Location: 10598 - 11806 (-)
Type: pfam
Location: 10598 - 11806 (-)
Gene ID: Rep_2375_c_165_10
Type: peptidase
Location: 11993 - 13831 (+)
Type: peptidase
Location: 11993 - 13831 (+)
Gene ID: Rep_2375_c_165_11
Type: CAZyme
Location: 13970 - 16438 (-)
Type: CAZyme
Location: 13970 - 16438 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.