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Cluster: Rep_2375_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2375_c_155 Rep_2375_c_155_15 14687 15862 + 2.A.4.7.4
sulfatase Rep_2375_c_155 Rep_2375_c_155_16 15859 16587 - S1_2
pfam Rep_2375_c_155 Rep_2375_c_155_17 17319 17849 + Ribosomal_S30AE | Ribosom_S30AE_C
TC Rep_2375_c_155 Rep_2375_c_155_18 18002 20569 + 3.A.5.1.3
pfam Rep_2375_c_155 Rep_2375_c_155_19 20655 21773 + RF-1 | PCRF
STP Rep_2375_c_155 Rep_2375_c_155_20 21826 22293 + CheW
CAZyme Rep_2375_c_155 Rep_2375_c_155_21 22286 23794 + GH77
Gene ID: Rep_2375_c_155_15
Type: TC
Location: 14687 - 15862 (+)
Gene ID: Rep_2375_c_155_16
Type: sulfatase
Location: 15859 - 16587 (-)
Gene ID: Rep_2375_c_155_17
Type: pfam
Location: 17319 - 17849 (+)
Gene ID: Rep_2375_c_155_18
Type: TC
Location: 18002 - 20569 (+)
Gene ID: Rep_2375_c_155_19
Type: pfam
Location: 20655 - 21773 (+)
Gene ID: Rep_2375_c_155_20
Type: STP
Location: 21826 - 22293 (+)
Gene ID: Rep_2375_c_155_21
Type: CAZyme
Location: 22286 - 23794 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Lachnospira
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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