Cluster: Rep_2375_CGC19
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_152 | Rep_2375_c_152_1 | 150 | 1535 | + | 2.A.66.1.33 |
| pfam | Rep_2375_c_152 | Rep_2375_c_152_2 | 1614 | 2366 | + | AIM24 |
| TC | Rep_2375_c_152 | Rep_2375_c_152_3 | 2374 | 4236 | + | 2.A.16.2.2 |
| pfam | Rep_2375_c_152 | Rep_2375_c_152_4 | 4328 | 4597 | + | SpoIIID |
| CAZyme | Rep_2375_c_152 | Rep_2375_c_152_5 | 4842 | 6341 | + | PL9 |
| TC | Rep_2375_c_152 | Rep_2375_c_152_6 | 6431 | 7522 | - | 8.A.59.4.1 |
| sulfatase | Rep_2375_c_152 | Rep_2375_c_152_7 | 7994 | 9181 | + | S1_2 |
| TC | Rep_2375_c_152 | Rep_2375_c_152_8 | 9415 | 10407 | + | 1.A.33.1.5 |
Gene ID: Rep_2375_c_152_1
Type: TC
Location: 150 - 1535 (+)
Type: TC
Location: 150 - 1535 (+)
Gene ID: Rep_2375_c_152_2
Type: pfam
Location: 1614 - 2366 (+)
Type: pfam
Location: 1614 - 2366 (+)
Gene ID: Rep_2375_c_152_3
Type: TC
Location: 2374 - 4236 (+)
Type: TC
Location: 2374 - 4236 (+)
Gene ID: Rep_2375_c_152_4
Type: pfam
Location: 4328 - 4597 (+)
Type: pfam
Location: 4328 - 4597 (+)
Gene ID: Rep_2375_c_152_5
Type: CAZyme
Location: 4842 - 6341 (+)
Type: CAZyme
Location: 4842 - 6341 (+)
Gene ID: Rep_2375_c_152_6
Type: TC
Location: 6431 - 7522 (-)
Type: TC
Location: 6431 - 7522 (-)
Gene ID: Rep_2375_c_152_7
Type: sulfatase
Location: 7994 - 9181 (+)
Type: sulfatase
Location: 7994 - 9181 (+)
Gene ID: Rep_2375_c_152_8
Type: TC
Location: 9415 - 10407 (+)
Type: TC
Location: 9415 - 10407 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.