Cluster: Rep_2375_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_146 | Rep_2375_c_146_10 | 7064 | 7942 | - | GH23 |
| STP | Rep_2375_c_146 | Rep_2375_c_146_11 | 7961 | 8395 | - | NUDIX |
| pfam | Rep_2375_c_146 | Rep_2375_c_146_12 | 8483 | 10000 | - | Transpeptidase | PBP_dimer_2 |
| TC | Rep_2375_c_146 | Rep_2375_c_146_13 | 9939 | 11309 | - | 2.A.103.1.3 |
Gene ID: Rep_2375_c_146_10
Type: CAZyme
Location: 7064 - 7942 (-)
Type: CAZyme
Location: 7064 - 7942 (-)
Gene ID: Rep_2375_c_146_11
Type: STP
Location: 7961 - 8395 (-)
Type: STP
Location: 7961 - 8395 (-)
Gene ID: Rep_2375_c_146_12
Type: pfam
Location: 8483 - 10000 (-)
Type: pfam
Location: 8483 - 10000 (-)
Gene ID: Rep_2375_c_146_13
Type: TC
Location: 9939 - 11309 (-)
Type: TC
Location: 9939 - 11309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.