Cluster: Rep_2375_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_138 | Rep_2375_c_138_12 | 13689 | 14375 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | Rep_2375_c_138 | Rep_2375_c_138_13 | 14397 | 15161 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2375_c_138 | Rep_2375_c_138_14 | 15311 | 19984 | - | PL9_1 |
| CAZyme | Rep_2375_c_138 | Rep_2375_c_138_15 | 20348 | 23665 | - | PL9_1 |
Gene ID: Rep_2375_c_138_12
Type: TC
Location: 13689 - 14375 (+)
Type: TC
Location: 13689 - 14375 (+)
Gene ID: Rep_2375_c_138_13
Type:
Location: 14397 - 15161 (+)
Type:
Location: 14397 - 15161 (+)
Gene ID: Rep_2375_c_138_14
Type: CAZyme
Location: 15311 - 19984 (-)
Type: CAZyme
Location: 15311 - 19984 (-)
Gene ID: Rep_2375_c_138_15
Type: CAZyme
Location: 20348 - 23665 (-)
Type: CAZyme
Location: 20348 - 23665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.