Cluster: Rep_2375_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2375_c_124 | Rep_2375_c_124_2 | 1226 | 2740 | - | 2.A.50.2.1 |
| pfam | Rep_2375_c_124 | Rep_2375_c_124_3 | 2970 | 3386 | + | GtrA_DPMS_TM |
| CAZyme | Rep_2375_c_124 | Rep_2375_c_124_4 | 3472 | 4209 | - | GT2 |
| NULL(UNKNOWN) | Rep_2375_c_124 | Rep_2375_c_124_5 | 4315 | 5472 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2375_c_124 | Rep_2375_c_124_6 | 5497 | 6687 | - | GT76 |
Gene ID: Rep_2375_c_124_2
Type: TC
Location: 1226 - 2740 (-)
Type: TC
Location: 1226 - 2740 (-)
Gene ID: Rep_2375_c_124_3
Type: pfam
Location: 2970 - 3386 (+)
Type: pfam
Location: 2970 - 3386 (+)
Gene ID: Rep_2375_c_124_4
Type: CAZyme
Location: 3472 - 4209 (-)
Type: CAZyme
Location: 3472 - 4209 (-)
Gene ID: Rep_2375_c_124_5
Type:
Location: 4315 - 5472 (-)
Type:
Location: 4315 - 5472 (-)
Gene ID: Rep_2375_c_124_6
Type: CAZyme
Location: 5497 - 6687 (-)
Type: CAZyme
Location: 5497 - 6687 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.