Cluster: Rep_2375_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2375
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_119 | Rep_2375_c_119_8 | 9415 | 10176 | + | CE1 |
| CAZyme | Rep_2375_c_119 | Rep_2375_c_119_9 | 10167 | 10937 | + | CE1 |
| pfam | Rep_2375_c_119 | Rep_2375_c_119_10 | 10950 | 11792 | + | Fumerase |
| pfam | Rep_2375_c_119 | Rep_2375_c_119_11 | 11806 | 12360 | + | Fumerase_C |
| TC | Rep_2375_c_119 | Rep_2375_c_119_12 | 12353 | 13411 | - | 3.A.15.2.1 |
Gene ID: Rep_2375_c_119_8
Type: CAZyme
Location: 9415 - 10176 (+)
Type: CAZyme
Location: 9415 - 10176 (+)
Gene ID: Rep_2375_c_119_9
Type: CAZyme
Location: 10167 - 10937 (+)
Type: CAZyme
Location: 10167 - 10937 (+)
Gene ID: Rep_2375_c_119_10
Type: pfam
Location: 10950 - 11792 (+)
Type: pfam
Location: 10950 - 11792 (+)
Gene ID: Rep_2375_c_119_11
Type: pfam
Location: 11806 - 12360 (+)
Type: pfam
Location: 11806 - 12360 (+)
Gene ID: Rep_2375_c_119_12
Type: TC
Location: 12353 - 13411 (-)
Type: TC
Location: 12353 - 13411 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.