Cluster: Rep_2375_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2375
- CGC Family ID: CGCFAM_06356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2375_c_111 | Rep_2375_c_111_1 | 618 | 1334 | - | CE4 |
| pfam | Rep_2375_c_111 | Rep_2375_c_111_2 | 1433 | 1930 | - | CarD_TRCF_RID | CarD_C |
| pfam | Rep_2375_c_111 | Rep_2375_c_111_3 | 2053 | 2493 | - | DUF6465 |
| TC | Rep_2375_c_111 | Rep_2375_c_111_4 | 2515 | 2763 | - | 8.A.8.1.1 |
Gene ID: Rep_2375_c_111_1
Type: CAZyme
Location: 618 - 1334 (-)
Type: CAZyme
Location: 618 - 1334 (-)
Gene ID: Rep_2375_c_111_2
Type: pfam
Location: 1433 - 1930 (-)
Type: pfam
Location: 1433 - 1930 (-)
Gene ID: Rep_2375_c_111_3
Type: pfam
Location: 2053 - 2493 (-)
Type: pfam
Location: 2053 - 2493 (-)
Gene ID: Rep_2375_c_111_4
Type: TC
Location: 2515 - 2763 (-)
Type: TC
Location: 2515 - 2763 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.