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Cluster: Rep_2367_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2367_c_4 Rep_2367_c_4_174 193699 194550 + 8.A.3.2.3
TC Rep_2367_c_4 Rep_2367_c_4_175 194553 195254 + 8.A.3.2.3
TC Rep_2367_c_4 Rep_2367_c_4_176 195404 197491 + 9.B.18.1.2
CAZyme Rep_2367_c_4 Rep_2367_c_4_177 197491 198315 + GT27
STP Rep_2367_c_4 Rep_2367_c_4_178 198393 199880 + B12-binding
CAZyme Rep_2367_c_4 Rep_2367_c_4_179 199988 200701 + GT2
CAZyme Rep_2367_c_4 Rep_2367_c_4_180 200711 201838 + GT4
Gene ID: Rep_2367_c_4_174
Type: TC
Location: 193699 - 194550 (+)
Gene ID: Rep_2367_c_4_175
Type: TC
Location: 194553 - 195254 (+)
Gene ID: Rep_2367_c_4_176
Type: TC
Location: 195404 - 197491 (+)
Gene ID: Rep_2367_c_4_177
Type: CAZyme
Location: 197491 - 198315 (+)
Gene ID: Rep_2367_c_4_178
Type: STP
Location: 198393 - 199880 (+)
Gene ID: Rep_2367_c_4_179
Type: CAZyme
Location: 199988 - 200701 (+)
Gene ID: Rep_2367_c_4_180
Type: CAZyme
Location: 200711 - 201838 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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