Cluster: Rep_2367_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2367_c_1 | Rep_2367_c_1_275 | 301690 | 302967 | - | 3.A.1.103.4 |
| TC | Rep_2367_c_1 | Rep_2367_c_1_276 | 302983 | 303774 | - | 3.A.1.103.4 |
| CAZyme | Rep_2367_c_1 | Rep_2367_c_1_277 | 303815 | 305113 | - | GT4 |
| CAZyme | Rep_2367_c_1 | Rep_2367_c_1_278 | 305129 | 306250 | - | GT4 |
Gene ID: Rep_2367_c_1_275
Type: TC
Location: 301690 - 302967 (-)
Type: TC
Location: 301690 - 302967 (-)
Gene ID: Rep_2367_c_1_276
Type: TC
Location: 302983 - 303774 (-)
Type: TC
Location: 302983 - 303774 (-)
Gene ID: Rep_2367_c_1_277
Type: CAZyme
Location: 303815 - 305113 (-)
Type: CAZyme
Location: 303815 - 305113 (-)
Gene ID: Rep_2367_c_1_278
Type: CAZyme
Location: 305129 - 306250 (-)
Type: CAZyme
Location: 305129 - 306250 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp003537285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.