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Cluster: Rep_2367_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2367_c_3 Rep_2367_c_3_74 62664 64514 - 3.A.1.135.6
TC Rep_2367_c_3 Rep_2367_c_3_75 64520 66826 - 3.A.1.135.6
pfam Rep_2367_c_3 Rep_2367_c_3_76 67076 67714 + ECF_trnsprt
peptidase Rep_2367_c_3 Rep_2367_c_3_77 67765 68793 + P01.101
TC Rep_2367_c_3 Rep_2367_c_3_78 68875 70398 - 4.A.1.1.7
TC Rep_2367_c_3 Rep_2367_c_3_79 70416 70895 - 4.A.1.2.11
CAZyme Rep_2367_c_3 Rep_2367_c_3_80 70889 72022 - CE9
Gene ID: Rep_2367_c_3_74
Type: TC
Location: 62664 - 64514 (-)
Gene ID: Rep_2367_c_3_75
Type: TC
Location: 64520 - 66826 (-)
Gene ID: Rep_2367_c_3_76
Type: pfam
Location: 67076 - 67714 (+)
Gene ID: Rep_2367_c_3_77
Type: peptidase
Location: 67765 - 68793 (+)
Gene ID: Rep_2367_c_3_78
Type: TC
Location: 68875 - 70398 (-)
Gene ID: Rep_2367_c_3_79
Type: TC
Location: 70416 - 70895 (-)
Gene ID: Rep_2367_c_3_80
Type: CAZyme
Location: 70889 - 72022 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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