Cluster: Rep_2367_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2367_c_2 | Rep_2367_c_2_190 | 197239 | 198099 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | Rep_2367_c_2 | Rep_2367_c_2_191 | 198096 | 198749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2367_c_2 | Rep_2367_c_2_192 | 198746 | 199126 | + | GntR |
| TC | Rep_2367_c_2 | Rep_2367_c_2_193 | 199129 | 199788 | + | 3.A.1.30.2 |
| NULL(UNKNOWN) | Rep_2367_c_2 | Rep_2367_c_2_194 | 199813 | 200313 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2367_c_2 | Rep_2367_c_2_195 | 200364 | 201329 | - | GT2 |
Gene ID: Rep_2367_c_2_190
Type: TC
Location: 197239 - 198099 (+)
Type: TC
Location: 197239 - 198099 (+)
Gene ID: Rep_2367_c_2_191
Type:
Location: 198096 - 198749 (+)
Type:
Location: 198096 - 198749 (+)
Gene ID: Rep_2367_c_2_192
Type: TF
Location: 198746 - 199126 (+)
Type: TF
Location: 198746 - 199126 (+)
Gene ID: Rep_2367_c_2_193
Type: TC
Location: 199129 - 199788 (+)
Type: TC
Location: 199129 - 199788 (+)
Gene ID: Rep_2367_c_2_194
Type:
Location: 199813 - 200313 (+)
Type:
Location: 199813 - 200313 (+)
Gene ID: Rep_2367_c_2_195
Type: CAZyme
Location: 200364 - 201329 (-)
Type: CAZyme
Location: 200364 - 201329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp003537285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.