Cluster: Rep_2367_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2367_c_1 | Rep_2367_c_1_1546 | 1653133 | 1654068 | - | GH23 |
| pfam | Rep_2367_c_1 | Rep_2367_c_1_1547 | 1654132 | 1655625 | - | Transpeptidase | PBP_dimer_2 |
| TC | Rep_2367_c_1 | Rep_2367_c_1_1548 | 1655570 | 1656934 | - | 2.A.103.1.3 |
Gene ID: Rep_2367_c_1_1546
Type: CAZyme
Location: 1653133 - 1654068 (-)
Type: CAZyme
Location: 1653133 - 1654068 (-)
Gene ID: Rep_2367_c_1_1547
Type: pfam
Location: 1654132 - 1655625 (-)
Type: pfam
Location: 1654132 - 1655625 (-)
Gene ID: Rep_2367_c_1_1548
Type: TC
Location: 1655570 - 1656934 (-)
Type: TC
Location: 1655570 - 1656934 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp003537285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.