Cluster: Rep_2367_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2367_c_1 | Rep_2367_c_1_1415 | 1522394 | 1523743 | + | 2.A.22.5.3 |
| STP | Rep_2367_c_1 | Rep_2367_c_1_1416 | 1523897 | 1524682 | + | Response_reg | Spo0A_C |
| peptidase | Rep_2367_c_1 | Rep_2367_c_1_1417 | 1524809 | 1525876 | + | C40.007 |
| CAZyme | Rep_2367_c_1 | Rep_2367_c_1_1418 | 1525988 | 1527424 | + | GT5 |
Gene ID: Rep_2367_c_1_1415
Type: TC
Location: 1522394 - 1523743 (+)
Type: TC
Location: 1522394 - 1523743 (+)
Gene ID: Rep_2367_c_1_1416
Type: STP
Location: 1523897 - 1524682 (+)
Type: STP
Location: 1523897 - 1524682 (+)
Gene ID: Rep_2367_c_1_1417
Type: peptidase
Location: 1524809 - 1525876 (+)
Type: peptidase
Location: 1524809 - 1525876 (+)
Gene ID: Rep_2367_c_1_1418
Type: CAZyme
Location: 1525988 - 1527424 (+)
Type: CAZyme
Location: 1525988 - 1527424 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp003537285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.