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Cluster: Rep_2367_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2367_c_1 Rep_2367_c_1_1140 1220639 1221364 - 3.A.1.17.8
pfam Rep_2367_c_1 Rep_2367_c_1_1141 1221490 1222476 + DHH | DHHA1
CAZyme Rep_2367_c_1 Rep_2367_c_1_1142 1222531 1223700 - GH25
peptidase Rep_2367_c_1 Rep_2367_c_1_1143 1224030 1224680 + S14.UPW
pfam Rep_2367_c_1 Rep_2367_c_1_1144 1224698 1225615 + Radical_SAM | Fer4_12
TC Rep_2367_c_1 Rep_2367_c_1_1145 1225666 1227093 + 2.A.2.1.1
CAZyme Rep_2367_c_1 Rep_2367_c_1_1146 1227107 1228954 + GH13_11
Gene ID: Rep_2367_c_1_1140
Type: TC
Location: 1220639 - 1221364 (-)
Gene ID: Rep_2367_c_1_1141
Type: pfam
Location: 1221490 - 1222476 (+)
Gene ID: Rep_2367_c_1_1142
Type: CAZyme
Location: 1222531 - 1223700 (-)
Gene ID: Rep_2367_c_1_1143
Type: peptidase
Location: 1224030 - 1224680 (+)
Gene ID: Rep_2367_c_1_1144
Type: pfam
Location: 1224698 - 1225615 (+)
Gene ID: Rep_2367_c_1_1145
Type: TC
Location: 1225666 - 1227093 (+)
Gene ID: Rep_2367_c_1_1146
Type: CAZyme
Location: 1227107 - 1228954 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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