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Cluster: Rep_2367_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2367_c_1 Rep_2367_c_1_943 1035487 1037382 + 3.A.3.6.10
TF Rep_2367_c_1 Rep_2367_c_1_944 1037399 1037758 + HTH_5
pfam Rep_2367_c_1 Rep_2367_c_1_945 1038106 1039011 + NadA
TC Rep_2367_c_1 Rep_2367_c_1_946 1039047 1040384 + 3.D.10.1.4
pfam Rep_2367_c_1 Rep_2367_c_1_947 1040407 1041267 + QRPTase_C | QRPTase_N
TF Rep_2367_c_1 Rep_2367_c_1_948 1041300 1041845 + HTH_11
CAZyme Rep_2367_c_1 Rep_2367_c_1_949 1041848 1042912 + GT111
Gene ID: Rep_2367_c_1_943
Type: TC
Location: 1035487 - 1037382 (+)
Gene ID: Rep_2367_c_1_944
Type: TF
Location: 1037399 - 1037758 (+)
Gene ID: Rep_2367_c_1_945
Type: pfam
Location: 1038106 - 1039011 (+)
Gene ID: Rep_2367_c_1_946
Type: TC
Location: 1039047 - 1040384 (+)
Gene ID: Rep_2367_c_1_947
Type: pfam
Location: 1040407 - 1041267 (+)
Gene ID: Rep_2367_c_1_948
Type: TF
Location: 1041300 - 1041845 (+)
Gene ID: Rep_2367_c_1_949
Type: CAZyme
Location: 1041848 - 1042912 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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