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Cluster: Rep_2367_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2367_c_1 Rep_2367_c_1_833 914823 916451 + GH43_10
NULL(UNKNOWN) Rep_2367_c_1 Rep_2367_c_1_834 916448 916930 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase Rep_2367_c_1 Rep_2367_c_1_835 916965 918167 - M23.UPB
TC Rep_2367_c_1 Rep_2367_c_1_836 918602 921289 + 3.A.1.122.2
TF Rep_2367_c_1 Rep_2367_c_1_837 921372 921686 + Trp_repressor
pfam Rep_2367_c_1 Rep_2367_c_1_838 921746 922387 - DUF1836
TC Rep_2367_c_1 Rep_2367_c_1_839 922671 923390 + 9.B.100.1.1
Gene ID: Rep_2367_c_1_833
Type: CAZyme
Location: 914823 - 916451 (+)
Gene ID: Rep_2367_c_1_834
Type:
Location: 916448 - 916930 (-)
Gene ID: Rep_2367_c_1_835
Type: peptidase
Location: 916965 - 918167 (-)
Gene ID: Rep_2367_c_1_836
Type: TC
Location: 918602 - 921289 (+)
Gene ID: Rep_2367_c_1_837
Type: TF
Location: 921372 - 921686 (+)
Gene ID: Rep_2367_c_1_838
Type: pfam
Location: 921746 - 922387 (-)
Gene ID: Rep_2367_c_1_839
Type: TC
Location: 922671 - 923390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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