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Cluster: Rep_2367_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2367_c_1 Rep_2367_c_1_799 874864 877587 - GT51
pfam Rep_2367_c_1 Rep_2367_c_1_800 877688 878326 + UPF0029 | DUF1949
NULL(UNKNOWN) Rep_2367_c_1 Rep_2367_c_1_801 878712 880325 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2367_c_1 Rep_2367_c_1_802 880474 881970 + 3.A.1.1.29
TC Rep_2367_c_1 Rep_2367_c_1_803 881985 882851 + 3.A.1.1.29
NULL(UNKNOWN) Rep_2367_c_1 Rep_2367_c_1_804 883149 884039 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2367_c_1 Rep_2367_c_1_805 884030 885586 + GH28
TC Rep_2367_c_1 Rep_2367_c_1_806 885617 887407 + 3.A.1.106.2
Gene ID: Rep_2367_c_1_799
Type: CAZyme
Location: 874864 - 877587 (-)
Gene ID: Rep_2367_c_1_800
Type: pfam
Location: 877688 - 878326 (+)
Gene ID: Rep_2367_c_1_801
Type:
Location: 878712 - 880325 (+)
Gene ID: Rep_2367_c_1_802
Type: TC
Location: 880474 - 881970 (+)
Gene ID: Rep_2367_c_1_803
Type: TC
Location: 881985 - 882851 (+)
Gene ID: Rep_2367_c_1_804
Type:
Location: 883149 - 884039 (+)
Gene ID: Rep_2367_c_1_805
Type: CAZyme
Location: 884030 - 885586 (+)
Gene ID: Rep_2367_c_1_806
Type: TC
Location: 885617 - 887407 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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