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Cluster: Rep_2367_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2367_c_1 Rep_2367_c_1_756 826018 826650 + 3.A.1.124.6
peptidase Rep_2367_c_1 Rep_2367_c_1_757 826696 828138 - S12.UPW
TC Rep_2367_c_1 Rep_2367_c_1_758 828285 829454 + 2.A.4.7.6
sulfatase Rep_2367_c_1 Rep_2367_c_1_759 829455 830183 - S1_2
pfam Rep_2367_c_1 Rep_2367_c_1_760 830802 831329 + Ribosomal_S30AE | Ribosom_S30AE_C
TC Rep_2367_c_1 Rep_2367_c_1_761 831527 834094 + 3.A.5.1.3
pfam Rep_2367_c_1 Rep_2367_c_1_762 834167 835285 + RF-1 | PCRF
STP Rep_2367_c_1 Rep_2367_c_1_763 835335 835835 + CheW
CAZyme Rep_2367_c_1 Rep_2367_c_1_764 835828 837444 + GH77
Gene ID: Rep_2367_c_1_756
Type: TC
Location: 826018 - 826650 (+)
Gene ID: Rep_2367_c_1_757
Type: peptidase
Location: 826696 - 828138 (-)
Gene ID: Rep_2367_c_1_758
Type: TC
Location: 828285 - 829454 (+)
Gene ID: Rep_2367_c_1_759
Type: sulfatase
Location: 829455 - 830183 (-)
Gene ID: Rep_2367_c_1_760
Type: pfam
Location: 830802 - 831329 (+)
Gene ID: Rep_2367_c_1_761
Type: TC
Location: 831527 - 834094 (+)
Gene ID: Rep_2367_c_1_762
Type: pfam
Location: 834167 - 835285 (+)
Gene ID: Rep_2367_c_1_763
Type: STP
Location: 835335 - 835835 (+)
Gene ID: Rep_2367_c_1_764
Type: CAZyme
Location: 835828 - 837444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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