Cluster: Rep_2367_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2367
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2367_c_1 | Rep_2367_c_1_567 | 638472 | 640340 | + | 3.A.16.1.2 |
| CAZyme | Rep_2367_c_1 | Rep_2367_c_1_568 | 640597 | 642711 | + | GH13_39 |
| pfam | Rep_2367_c_1 | Rep_2367_c_1_569 | 642799 | 643659 | + | Lipase_GDSL | Lipase_GDSL_2 |
| pfam | Rep_2367_c_1 | Rep_2367_c_1_570 | 643659 | 644369 | + | tRNA_m1G_MT |
| TC | Rep_2367_c_1 | Rep_2367_c_1_571 | 644413 | 646206 | + | 9.B.34.1.2 |
Gene ID: Rep_2367_c_1_567
Type: TC
Location: 638472 - 640340 (+)
Type: TC
Location: 638472 - 640340 (+)
Gene ID: Rep_2367_c_1_568
Type: CAZyme
Location: 640597 - 642711 (+)
Type: CAZyme
Location: 640597 - 642711 (+)
Gene ID: Rep_2367_c_1_569
Type: pfam
Location: 642799 - 643659 (+)
Type: pfam
Location: 642799 - 643659 (+)
Gene ID: Rep_2367_c_1_570
Type: pfam
Location: 643659 - 644369 (+)
Type: pfam
Location: 643659 - 644369 (+)
Gene ID: Rep_2367_c_1_571
Type: TC
Location: 644413 - 646206 (+)
Type: TC
Location: 644413 - 646206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp003537285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.