Cluster: Rep_234_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate: beta-glucan
- Genome ID: Rep_234
- CGC Family ID: CGCFAM_01240
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_234_c_145 | Rep_234_c_145_22 | 28660 | 29991 | + | CBM6 | GH43_29 |
| CAZyme | Rep_234_c_145 | Rep_234_c_145_23 | 30086 | 33046 | + | CBM6 | CBM91 | GH43_10 | GH43_29 |
| CAZyme | Rep_234_c_145 | Rep_234_c_145_24 | 33152 | 35587 | + | GH95 |
| CAZyme | Rep_234_c_145 | Rep_234_c_145_25 | 35734 | 37839 | + | CBM91 | GH43_10 |
| TC | Rep_234_c_145 | Rep_234_c_145_26 | 37931 | 38677 | - | 1.B.44.1.2 |
Gene ID: Rep_234_c_145_22
Type: CAZyme
Location: 28660 - 29991 (+)
Type: CAZyme
Location: 28660 - 29991 (+)
Gene ID: Rep_234_c_145_23
Type: CAZyme
Location: 30086 - 33046 (+)
Type: CAZyme
Location: 30086 - 33046 (+)
Gene ID: Rep_234_c_145_24
Type: CAZyme
Location: 33152 - 35587 (+)
Type: CAZyme
Location: 33152 - 35587 (+)
Gene ID: Rep_234_c_145_25
Type: CAZyme
Location: 35734 - 37839 (+)
Type: CAZyme
Location: 35734 - 37839 (+)
Gene ID: Rep_234_c_145_26
Type: TC
Location: 37931 - 38677 (-)
Type: TC
Location: 37931 - 38677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900546535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_234_c_145_26 | vegetarian > vegan | 1.82859 | 0.00424 |