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Cluster: Rep_234_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_234_c_128 Rep_234_c_128_15 16283 19627 + 3.A.5.1.1
NULL(UNKNOWN) Rep_234_c_128 Rep_234_c_128_16 19722 19895 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_234_c_128 Rep_234_c_128_17 19876 22407 + 9.A.8.1.6
CAZyme Rep_234_c_128 Rep_234_c_128_18 22476 26048 - GH115 | GH43_24
TC Rep_234_c_128 Rep_234_c_128_19 26166 27863 - 8.A.46.1.6
TC Rep_234_c_128 Rep_234_c_128_20 27878 30883 - 1.B.14.6.1
TF Rep_234_c_128 Rep_234_c_128_21 31136 35194 + HTH_AraC
NULL(UNKNOWN) Rep_234_c_128 Rep_234_c_128_22 35224 35331 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_234_c_128 Rep_234_c_128_23 35328 36779 + GH28
Gene ID: Rep_234_c_128_15
Type: TC
Location: 16283 - 19627 (+)
Gene ID: Rep_234_c_128_16
Type:
Location: 19722 - 19895 (+)
Gene ID: Rep_234_c_128_17
Type: TC
Location: 19876 - 22407 (+)
Gene ID: Rep_234_c_128_18
Type: CAZyme
Location: 22476 - 26048 (-)
Gene ID: Rep_234_c_128_19
Type: TC
Location: 26166 - 27863 (-)
Gene ID: Rep_234_c_128_20
Type: TC
Location: 27878 - 30883 (-)
Gene ID: Rep_234_c_128_21
Type: TF
Location: 31136 - 35194 (+)
Gene ID: Rep_234_c_128_22
Type:
Location: 35224 - 35331 (+)
Gene ID: Rep_234_c_128_23
Type: CAZyme
Location: 35328 - 36779 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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